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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015955208.1_cds_XP_016493796.1_83869
CDS Infomation

[gene=LOC107813096] [db_xref=GeneID:107813096] [protein=uncharacterized protein LOC107813096] [protein_id=XP_016493796.1] [location=join(91400..92038,92950..93021,93136..93340,93429..93537,94533..94625,94740..94832,94967..95059,95153..95245,95325..95406,95504..95563,95682..95734,95854..96020,98265..98478,98562..98619,98700..98756,98924..99169,105855..105919,106010..106066,106158..106251,106967..107107,107226..107354)] [gbkey=CDS]
Sequence

ATGATCAGTGAATTCGATTCGCCGTCGTTGCCCCGGTCAAAACTCGAACCCGGAACCGGA
ATTGATATCGAAACCGGTGATCCATGTAACGGTAAACCGGAATCGAACGGTTCGGTTCAC
GGTGTTCGGTTCGAGGAAGTTGTTCCGGTTAGGGCTCGTGATAGGAACGGTCTCGTCGTG
TACAGGAGGAATAAGCGGTTAAAGAGAGCCGCTAATGTTGACGACAGCGGCGGCGGTGGC
GGTGGCGGAGTAGAACCGAGTGATGCGTCCAAGTGTAATTCAGGCGGTGGTAAAATTGTA
CATAAGAATGAAACGGAGGGTATTTCCGGAATTCCGGAGATGGTGGAGATTGAAGTCAAA
GAGGAGTCAACGTTGGCGGCAGCAAATCGTGATGTTAGTGTTACAGGTAGTAGTAGGAGG
TTTACGAGGTCGGCTTTGAAGCTGAATGTGGAGCCTCTTGATGAGAATTTGGAAGTGTTG
GAGGAGGGGGAATTGATCACATGTGGTGAAGTTCATGATAGTAATACTGGTGGATCAAAG
AAGAGGATTTCGATTATAGGAAGGCCTACTACGGTTAAGGAGCTTTTCGAGACCGGTTTG
CTCGAAGGCTATCCTGTTTTCTATAATGGTGGCAAGAGGGGAATTCGACTGAGGGGAACA
ATCAAAGATAATGGAATTCTATGCTCTTGTGATCTGTGCAAGGGAGCCAGGGTTGTTCCT
CCTGGCAAATTTGAGATCCATGCATGTAAAGCATATAGACGTGCATCACAGTATATCTGC
CTGGAAAACGGGAAGAGTCTCCTTGATGTGGTCAAAGAATGTAGGAAAGGTTCTTTGAAG
AAATTGGAAGCAACAATTCGGAGCTTCATTGGTCCGATTCCTGTGAAGGAAATTATCATT
TGTCGGAATTGCAATGGGTCTTTTTCTGCAACTTCAGCTGGAAAAGTTGACCAAATTTGT
GATTCATGCATAATCTCTTCAAGATCCGAAGCCACTCCAACTCGGTCAATAATAGTTGAA
GCTGGGATTTTTGATCCTCTTCCGAACTCAAATTCCTCCGAAACTTCAACTATGTCAGAT
ACTTCACTAAAAAGAAGTAGAGGAAGAAAAAAGAGAAAGGCTGTGGAAATATATTCAAGG
AAAAGGTCCATTAGAATATCTTCGGCACATATAATCTCCGGAAGGAAGGATCAGTTGAAG
ACACCAAACAAGTTATCCACTCCAGCTTTTGCTCCACAGTCAAATGGAGCTGCCACGATG
TGCAATTCATTCAGAGATAATATGCAGGGCAAGATCTCGAAAAAATTGTCGAAATCCATT
GCAGCTTCAAATTCCTCGAAAGTTGGTCCTCTTGGTGTTCCAATGCACTCTAGGACCCAA
TGGAAAATTACAAAAAAGGATCAAAAGATGCATTGGTTGGTTTTTGAGGAAGGTGGACTG
CCCGATGGGACTGAAGTAGCTTATTATTCTCGTGGAAAGAAATTGCTCGTTGGTTATAAG
CAGGGATCTGGTATATTTTGTTCTTGCTGCAATTGTGAGGTTAGTCCATCACAATTTGAA
GCTCATGCAGGTTGGGCGTCTCGCAAAAAACCCTATGGATACATATATACTTCCAATGGG
GTGTCTCTACATGAATTTGCTTTATCCCTATTGAGAGGTCGTAAGTCTTCTGTCACAGAC
AGCGATGACTTGTGCACCATATGCGCAGATGGTGGAAAACTGGTGCTTTGTGATGGATGT
CCAAGGGCCTTCCATAAAGGGTGTGCATCATTGTCAGCTGTTCCCCGTGGTAAATGGTAC
TGTAAATATTGTGAAAACAAGTTTCAGAGGGAGAAGTTTGTGGAGCACAATGCAAACGCG
GTTGCTGCTGGGAGGATTTCTGGTATTGATCCCATAGAGCAAATAACTGAACGTTGCATT
CGTACTGTCAAGAACCCAGAAGAGGCAGAAGTTATAGCATGTGTTTTATGCAGATGTTAT
GATTTTAGCAAGTCTGGATTTGGTCCACGCACGGTTATCCTCTGTGACCAGTGTGAGAAG
GAATATCATGTTGGCTGCTTGAAGAAACGCAAGATAGCAGATTTAAAGGAGTTGCCTAAA
GGAAAATGGTTCTGTTGTGTGGATTGCAAGAGGATCTATTCTGCACTGCAAAAGTTGCTG
AACTCGGGAGATGAGAAGCTGTCAGAATCTTGCCTGGGTGCTGTAAGAATGAAGCTAAAG
GAAAAAAGTTTGAATTCAGTTGGTGATCTTGATGTGAGATGGAGACTTTTAAGTGGCAAA
ATTACTTCCCGTGAAACCAGAGTGCTACTAGCAGAAGCTGTTTCAATCTTCCATGATTGC
TTCGATCCTATTGTTGATTCGGCAACTGGACGTGATTTCATTCCATCTATGGTCTATGGA
AGGAATATTAGGGGCCAAGACTTTGGGGGCATGTACTGTGCTATATTGACTGTAAACTCA
ATAGTAGTATCAGCTGGGATCCTCCGTATTTTTGGTCCGGATATTGCAGAGCTTCCTCTA
GTGGCAACACGTATTGATAGCCAAGGGAAGGGTTACTTTCAGTTGCTGCTCTCGTGCATA
GAAAAATTGCTTGCATTTTTAAATGTAAGAAGATTTGTACTACCTTCTGCTGTGGAAGCA
ATGTCAATATGGACGACGAAATTCGGATTCAAAGAGATACCACCAGACCAGCTTGTCATC
TACAAAAAGACCTGTTGGCAGATGATTACCTTCAAAGGAACATCTATGCTGGAAAAAATG
GTTCCTAAATGTCGAATTATTCGGCAGGGGGGAACTGAAACTGATGCACCAGATGAGTAG

Peptide Sequence

PEP ID

XP_016493796.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107813096 [Nicotiana tabacum]
Sequence

MISEFDSPSLPRSKLEPGTGIDIETGDPCNGKPESNGSVHGVRFEEVVPVRARDRNGLVV
YRRNKRLKRAANVDDSGGGGGGGVEPSDASKCNSGGGKIVHKNETEGISGIPEMVEIEVK
EESTLAAANRDVSVTGSSRRFTRSALKLNVEPLDENLEVLEEGELITCGEVHDSNTGGSK
KRISIIGRPTTVKELFETGLLEGYPVFYNGGKRGIRLRGTIKDNGILCSCDLCKGARVVP
PGKFEIHACKAYRRASQYICLENGKSLLDVVKECRKGSLKKLEATIRSFIGPIPVKEIII
CRNCNGSFSATSAGKVDQICDSCIISSRSEATPTRSIIVEAGIFDPLPNSNSSETSTMSD
TSLKRSRGRKKRKAVEIYSRKRSIRISSAHIISGRKDQLKTPNKLSTPAFAPQSNGAATM
CNSFRDNMQGKISKKLSKSIAASNSSKVGPLGVPMHSRTQWKITKKDQKMHWLVFEEGGL
PDGTEVAYYSRGKKLLVGYKQGSGIFCSCCNCEVSPSQFEAHAGWASRKKPYGYIYTSNG
VSLHEFALSLLRGRKSSVTDSDDLCTICADGGKLVLCDGCPRAFHKGCASLSAVPRGKWY
CKYCENKFQREKFVEHNANAVAAGRISGIDPIEQITERCIRTVKNPEEAEVIACVLCRCY
DFSKSGFGPRTVILCDQCEKEYHVGCLKKRKIADLKELPKGKWFCCVDCKRIYSALQKLL
NSGDEKLSESCLGAVRMKLKEKSLNSVGDLDVRWRLLSGKITSRETRVLLAEAVSIFHDC
FDPIVDSATGRDFIPSMVYGRNIRGQDFGGMYCAILTVNSIVVSAGILRIFGPDIAELPL
VATRIDSQGKGYFQLLLSCIEKLLAFLNVRRFVLPSAVEAMSIWTTKFGFKEIPPDQLVI
YKKTCWQMITFKGTSMLEKMVPKCRIIRQGGTETDAPDE

Transcript Sequence

Gene sequence data has not been registered.